EnhancerDB
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  3. rs150601040[chr12:54827955]
Enhancers that have rs150601040[chr12:54827955]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54815065 54835675 enh14748
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs150601040[chr12:54827955]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54827953 54827965 PKNOX1 JASPAR yes 121041882
chr12 54827953 54827965 PKNOX2 JASPAR yes 121041883
chr12 54827953 54827965 TGIF1 JASPAR yes 121041884
chr12 54827954 54827963 SNAI2 JASPAR yes 121041885
chr12 54827954 54827964 FIGLA JASPAR yes 121041886
chr12 54827954 54827964 ID4 JASPAR yes 121041887
chr12 54827954 54827964 TCF3 JASPAR yes 121041888
chr12 54827954 54827964 TCF4 JASPAR yes 121041889
Genes associated with rs150601040[chr12:54827955], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More