EnhancerDB
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  3. rs150601333[chr19:2488754]
Enhancers that have rs150601333[chr19:2488754]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs150601333[chr19:2488754]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2487107 2490254 TCF7L2 GTRD no Colon (HCT116) 108360382
chr19 2487601 2489790 TCF7L2 GTRD no Colon (HCT116) 108360383
chr19 2487661 2489954 TCF7L2 GTRD no Colon (HCT116) 108360384
chr19 2487763 2490018 TCF7L2 GTRD no Colon (HCT116) 108360385
chr19 2487775 2489823 TCF7L2 GTRD no Colon (HCT116) 108360386
chr19 2487933 2489965 TCF7L2 GTRD no Colon (HCT116) 108360387
chr19 2487990 2490105 ZNF274 GTRD no Blood (GM12878) 108360388
chr19 2488428 2489968 ZNF274 GTRD no Blood (GM12878) 108360389
chr19 2488498 2488837 ZNF274 GTRD no Liver (HepG2) 21835500
chr19 2488527 2489703 ZBTB33 GTRD no Brain (SK-N-SH) 108360390
chr19 2488602 2490089 ZNF143 GTRD no Epithelial (MCF-7) 21835501
chr19 2488602 2490089 ZNF143 GTRD no Epithelial (MCF-7) 108360391
chr19 2488665 2490101 ZBTB33 GTRD no Lung (A549) 108360392
chr19 2488713 2489638 TCF7L2 GTRD no Colon (HCT116) 108360393
chr19 2488740 2490112 ZNF274 GTRD no Cervix (HeLa-S3) 21835502
chr19 2488740 2490112 ZNF274 GTRD no Cervix (HeLa-S3) 108360394
chr19 2488751 2488763 HES5 JASPAR yes 112065560
chr19 2488751 2488763 HES7 JASPAR yes 112065561
chr19 2488752 2488762 CLOCK JASPAR yes 112065562
chr19 2488752 2488762 HEY1 JASPAR yes 112065563
chr19 2488752 2488762 HEY2 JASPAR yes 112065564
chr19 2488752 2488762 MAX JASPAR yes 112065565
chr19 2488752 2488762 MNT JASPAR yes 112065566
chr19 2488753 2488760 USF1 JASPAR yes 112065567
chr19 2488754 2488759 MYC TRANSFAC yes 112065568
chr19 2488754 2488759 USF1 TRANSFAC yes 112065569
chr19 2488754 2488759 USF2 TRANSFAC yes 112065570
Genes associated with rs150601333[chr19:2488754], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More