EnhancerDB
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  3. rs150652055[chr19:2541422]
Enhancers that have rs150652055[chr19:2541422]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs150652055[chr19:2541422]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2539983 2541557 ZBTB33 GTRD no Lung (A549) 21836484
chr19 2539983 2541557 ZBTB33 GTRD no Lung (A549) 108361546
chr19 2540170 2541619 ZNF143 GTRD no Epithelial (MCF-7) 21836486
chr19 2540170 2541619 ZNF143 GTRD no Epithelial (MCF-7) 108361548
chr19 2540177 2543122 TCF7L2 GTRD no Colon (HCT116) 21836487
chr19 2540177 2543122 TCF7L2 GTRD no Colon (HCT116) 108361549
chr19 2540208 2543082 TCF7L2 GTRD no Colon (HCT116) 21836489
chr19 2540208 2543082 TCF7L2 GTRD no Colon (HCT116) 108361551
chr19 2540226 2541499 P63 GTRD no Skin (Keratinocyte) 108361552
chr19 2540241 2543099 TCF7L2 GTRD no Colon (HCT116) 21836490
chr19 2540241 2543099 TCF7L2 GTRD no Colon (HCT116) 108361553
chr19 2540255 2541475 ZBTB33 GTRD no Lung (A549) 21836491
chr19 2540255 2541475 ZBTB33 GTRD no Lung (A549) 108361554
chr19 2540261 2541462 ZNF143 GTRD no Epithelial (MCF-7) 21836492
chr19 2540261 2541462 ZNF143 GTRD no Epithelial (MCF-7) 108361555
chr19 2540286 2541453 ZNF143 GTRD no Epithelial (MCF-7) 21836493
chr19 2540286 2541453 ZNF143 GTRD no Epithelial (MCF-7) 108361556
chr19 2540298 2541433 ZBTB33 GTRD no Lung (A549) 21836495
chr19 2540298 2541433 ZBTB33 GTRD no Lung (A549) 108361558
chr19 2540309 2541446 ZNF274 GTRD no Liver (HepG2) 21836496
chr19 2540309 2541446 ZNF274 GTRD no Liver (HepG2) 108361559
chr19 2540322 2541472 ZBTB33 GTRD no Brain (SK-N-SH) 21836497
chr19 2540322 2541472 ZBTB33 GTRD no Brain (SK-N-SH) 108361560
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 21836499
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361562
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361563
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361564
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 21836500
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361565
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361566
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361567
chr19 2540343 2541456 ZNF143 GTRD no Epithelial (MCF-7) 21836501
chr19 2540343 2541456 ZNF143 GTRD no Epithelial (MCF-7) 108361568
chr19 2540352 2541500 P63 GTRD no Skin (Keratinocyte) 108361570
chr19 2540353 2541586 ZNF274 GTRD no Cervix (HeLa-S3) 21836503
chr19 2540353 2541586 ZNF274 GTRD no Cervix (HeLa-S3) 108361571
chr19 2540379 2541623 ZBTB33 GTRD no Brain (SK-N-SH) 21836507
chr19 2540379 2541623 ZBTB33 GTRD no Brain (SK-N-SH) 108361575
chr19 2540379 2542161 ZBTB33 GTRD no Lung (A549) 21836508
chr19 2540379 2542161 ZBTB33 GTRD no Lung (A549) 108361576
chr19 2540394 2541558 ZNF274 GTRD no Liver (HepG2) 21836510
chr19 2540394 2541558 ZNF274 GTRD no Liver (HepG2) 108361578
chr19 2540399 2541551 P63 GTRD no Skin (Keratinocyte) 108361579
chr19 2540405 2541623 TCF7L2 GTRD no Colon (HCT116) 21836513
chr19 2540405 2541623 TCF7L2 GTRD no Colon (HCT116) 108361582
chr19 2540410 2541434 ZBTB33 GTRD no Lung (A549) 21836514
chr19 2540410 2541434 ZBTB33 GTRD no Lung (A549) 108361583
chr19 2540418 2541558 ZNF274 GTRD no Cervix (HeLa-S3) 21836515
chr19 2540418 2541558 ZNF274 GTRD no Cervix (HeLa-S3) 108361584
chr19 2540422 2541468 ZNF274 GTRD no Cervix (HeLa-S3) 21836516
chr19 2540422 2541468 ZNF274 GTRD no Cervix (HeLa-S3) 108361585
chr19 2540432 2541549 ZBTB33 GTRD no Brain (SK-N-SH) 21836517
chr19 2540432 2541549 ZBTB33 GTRD no Brain (SK-N-SH) 108361586
chr19 2540433 2541521 ZNF274 GTRD no Liver (HepG2) 21836518
chr19 2540433 2541521 ZNF274 GTRD no Liver (HepG2) 108361587
chr19 2540435 2541500 ZBTB33 GTRD no Brain (SK-N-SH) 21836519
chr19 2540435 2541500 ZBTB33 GTRD no Brain (SK-N-SH) 108361588
chr19 2540438 2541483 P63 GTRD no Skin (Keratinocyte) 108361590
chr19 2540448 2541560 ZBTB33 GTRD no Lung (A549) 21836523
chr19 2540448 2541560 ZBTB33 GTRD no Lung (A549) 108361593
chr19 2540449 2541615 ZBTB33 GTRD no Lung (A549) 21836524
chr19 2540449 2541615 ZBTB33 GTRD no Lung (A549) 108361594
chr19 2540453 2541571 ZBTB33 GTRD no Brain (SK-N-SH) 21836526
chr19 2540453 2541571 ZBTB33 GTRD no Brain (SK-N-SH) 108361596
chr19 2540474 2541458 ZBTB33 GTRD no Lung (A549) 21836537
chr19 2540474 2541458 ZBTB33 GTRD no Lung (A549) 108361607
chr19 2540477 2541516 ZBTB33 GTRD no Lung (A549) 21836538
chr19 2540477 2541516 ZBTB33 GTRD no Lung (A549) 108361608
chr19 2540508 2541426 ZNF274 GTRD no Liver (HepG2) 21836549
chr19 2540508 2541426 ZNF274 GTRD no Liver (HepG2) 108361619
chr19 2540513 2541605 ZNF274 GTRD no Cervix (HeLa-S3) 21836551
chr19 2540513 2541605 ZNF274 GTRD no Cervix (HeLa-S3) 108361621
chr19 2540516 2541518 ZBTB33 GTRD no Brain (SK-N-SH) 21836552
chr19 2540516 2541518 ZBTB33 GTRD no Brain (SK-N-SH) 108361622
chr19 2540548 2541482 TCF7L2 GTRD no Colon (HCT116) 21836571
chr19 2540548 2541482 TCF7L2 GTRD no Colon (HCT116) 108361641
chr19 2540549 2541460 ZBTB33 GTRD no Brain (SK-N-SH) 21836572
chr19 2540549 2541460 ZBTB33 GTRD no Brain (SK-N-SH) 108361642
chr19 2540590 2541471 TCF7L2 GTRD no Colon (HCT116) 21836609
chr19 2540590 2541471 TCF7L2 GTRD no Colon (HCT116) 108361679
chr19 2540597 2541724 TCF7L2 GTRD no Colon (HCT116) 21836613
chr19 2540597 2541724 TCF7L2 GTRD no Colon (HCT116) 108361683
chr19 2540660 2541525 ZBTB33 GTRD no Lung (A549) 21836656
chr19 2540660 2541525 ZBTB33 GTRD no Lung (A549) 108361727
chr19 2540850 2541476 ZNF274 GTRD no Liver (HepG2) 21836740
chr19 2540850 2541476 ZNF274 GTRD no Liver (HepG2) 108361827
chr19 2541407 2541426 PAX5 JASPAR yes 112071886
Genes associated with rs150652055[chr19:2541422], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More