EnhancerDB
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  3. rs150977408[chr17:62985856]
Enhancers that have rs150977408[chr17:62985856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs150977408[chr17:62985856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62985563 62989044 ZNF143 GTRD no Epithelial (MCF-7) 21780807
chr17 62985563 62989044 ZNF143 GTRD no Epithelial (MCF-7) 108283232
chr17 62985838 62985858 RREB1 JASPAR yes 55336066
chr17 62985839 62985860 IRF1 JASPAR yes 55336067
chr17 62985843 62985857 IRF7 JASPAR yes 55336069
chr17 62985843 62985858 IRF9 JASPAR yes 55336070
chr17 62985843 62985863 RREB1 JASPAR yes 55336071
chr17 62985844 62985862 IRF2 JASPAR yes 55336072
chr17 62985844 62985865 IRF1 JASPAR yes 55336073
chr17 62985845 62985860 RUNX2 JASPAR yes 55336075
chr17 62985846 62985861 STAT2 JASPAR yes 55336076
chr17 62985847 62985867 RREB1 JASPAR yes 55336077
chr17 62985848 62985860 IRF1 JASPAR yes 55336078
chr17 62985848 62985863 IRF9 JASPAR yes 55336079
chr17 62985849 62985861 IRF1 JASPAR yes 55336080
chr17 62985850 62985870 RREB1 JASPAR yes 55336081
chr17 62985850 62985871 IRF1 JASPAR yes 55336082
Genes associated with rs150977408[chr17:62985856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More