EnhancerDB
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  3. rs150987489[chr1:209579654]
Enhancers that have rs150987489[chr1:209579654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 209579567 209579719 vista4898
VISTA
Transcript factors that have rs150987489[chr1:209579654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209579305 209579799 ZNF274 GTRD no Cervix (HeLa-S3) 21375281
chr1 209579305 209579799 ZNF274 GTRD no Cervix (HeLa-S3) 107865739
chr1 209579333 209579794 ZNF274 GTRD no Bone Marrow (K562) 107865740
chr1 209579360 209579732 ZNF274 GTRD no Bone Marrow (K562) 107865741
chr1 209579372 209579776 ZNF274 GTRD no Liver (HepG2) 107865742
chr1 209579412 209579761 ZNF274 GTRD no Liver (HepG2) 107865743
chr1 209579645 209579666 IRF1 JASPAR yes 34972344
chr1 209579645 209579666 IRF1 JASPAR yes 118448218
chr1 209579648 209579657 JDP2 JASPAR yes 34972345
chr1 209579648 209579657 JDP2 JASPAR yes 118448219
chr1 209579649 209579663 IRF8 JASPAR yes 34972346
chr1 209579649 209579663 IRF8 JASPAR yes 118448220
chr1 209579650 209579668 IRF2 JASPAR yes 34972347
chr1 209579650 209579668 IRF2 JASPAR yes 118448221
chr1 209579651 209579672 IRF1 JASPAR yes 34972348
chr1 209579651 209579672 IRF1 JASPAR yes 118448222
chr1 209579653 209579668 PRDM1 JASPAR yes 34972349
chr1 209579653 209579668 STAT2 JASPAR yes 34972350
chr1 209579653 209579668 PRDM1 JASPAR yes 118448223
chr1 209579653 209579668 STAT2 JASPAR yes 118448224
chr1 209579654 209579668 STAT1 JASPAR yes 34972351
chr1 209579654 209579668 STAT1 JASPAR yes 118448225
Genes associated with rs150987489[chr1:209579654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More