EnhancerDB
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  3. rs151028935[chr1:3245593]
Enhancers that have rs151028935[chr1:3245593]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 3244561 3248729 vista2
VISTA
Transcript factors that have rs151028935[chr1:3245593]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3245580 3245595 TFAP2C JASPAR yes 26280611
chr1 3245580 3245595 TFAP2C JASPAR yes 71117572
chr1 3245582 3245594 TFAP2A JASPAR yes 26280612
chr1 3245582 3245594 TFAP2B JASPAR yes 26280613
chr1 3245582 3245594 TFAP2C JASPAR yes 26280614
chr1 3245582 3245594 TFAP2A JASPAR yes 71117573
chr1 3245582 3245594 TFAP2B JASPAR yes 71117574
chr1 3245582 3245594 TFAP2C JASPAR yes 71117575
chr1 3245582 3245597 TFAP2A JASPAR yes 26280615
chr1 3245582 3245597 TFAP2A JASPAR yes 71117576
chr1 3245583 3245594 TFAP2A JASPAR yes 26280616
chr1 3245583 3245594 TFAP2B JASPAR yes 26280617
chr1 3245583 3245594 TFAP2A JASPAR yes 71117577
chr1 3245583 3245594 TFAP2B JASPAR yes 71117578
chr1 3245584 3245593 TFAP2A JASPAR yes 26280618
chr1 3245584 3245593 TFAP2A JASPAR yes 71117579
Genes associated with rs151028935[chr1:3245593], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More