EnhancerDB
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  3. rs151296778[chr12:46867097]
Enhancers that have rs151296778[chr12:46867097]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs151296778[chr12:46867097]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46867087 46867097 HOXC10 JASPAR yes 120625971
chr12 46867087 46867097 HOXD11 JASPAR yes 120625972
chr12 46867087 46867098 HOXA10 JASPAR yes 120625973
chr12 46867087 46867098 HOXC11 JASPAR yes 120625974
chr12 46867087 46867098 HOXC12 JASPAR yes 120625975
chr12 46867087 46867098 HOXC13 JASPAR yes 120625976
chr12 46867088 46867097 CDX1 JASPAR yes 120625977
chr12 46867088 46867099 CDX2 JASPAR yes 120625978
Genes associated with rs151296778[chr12:46867097], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More