EnhancerDB
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  3. rs151312389[chr17:40401238]
Enhancers that have rs151312389[chr17:40401238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs151312389[chr17:40401238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40398586 40401546 ZBTB33 GTRD no Lung (A549) 108259994
chr17 40400445 40401406 POLR2A UCSC Txn Factor no Conserved 108259996
chr17 40400600 40401284 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758460
chr17 40400600 40401284 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108260007
chr17 40401226 40401239 NFKB1 JASPAR yes 54289355
chr17 40401226 40401239 NFKB2 JASPAR yes 54289356
Genes associated with rs151312389[chr17:40401238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More