EnhancerDB
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  3. rs1515660[chr1:235020659]
Enhancers that have rs1515660[chr1:235020659]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs1515660[chr1:235020659]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235016961 235020685 ZNF274 GTRD no Blood (GM12878) 21399820
chr1 235016961 235020685 ZNF274 GTRD no Blood (GM12878) 107883944
chr1 235020647 235020664 RARA JASPAR yes 36325689
Genes associated with rs1515660[chr1:235020659], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 235710987 235814054 - GNG4 ENSG00000168243.6 235814054 690328 Esophagus 0.184189 1971