EnhancerDB
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  3. rs1516727[chr3:185825314]
Enhancers that have rs1516727[chr3:185825314]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185808545 185825535 enh7742
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr3 185825302 185825582 vista43470
VISTA
Transcript factors that have rs1516727[chr3:185825314]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185825222 185825789 E2F1 UCSC Txn Factor no Conserved 108531274
chr3 185825308 185825323 STAT2 JASPAR yes 8313290
chr3 185825308 185825323 STAT2 JASPAR yes 71100192
Genes associated with rs1516727[chr3:185825314], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More