EnhancerDB
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  3. rs1534550[chr17:57715911]
Enhancers that have rs1534550[chr17:57715911]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57699645 57721455 enh4504
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs1534550[chr17:57715911]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57715901 57715911 NFATC3 JASPAR yes 55073525
chr17 57715910 57715930 RREB1 JASPAR yes 55073527
chr17 57715911 57715931 RREB1 JASPAR yes 55073528
Genes associated with rs1534550[chr17:57715911], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More