EnhancerDB
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  3. rs1545341[chr1:208349087]
Enhancers that have rs1545341[chr1:208349087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208343485 208368555 enh12612
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs1545341[chr1:208349087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208349075 208349090 TFAP2A JASPAR yes 34903316
chr1 208349075 208349090 TFAP2C JASPAR yes 34903317
chr1 208349078 208349089 EBF1 JASPAR yes 34903318
chr1 208349078 208349089 TFAP2A JASPAR yes 34903319
chr1 208349078 208349089 TFAP2B JASPAR yes 34903320
chr1 208349078 208349089 TFAP2C JASPAR yes 34903321
chr1 208349079 208349088 TFAP2A JASPAR yes 34903322
Genes associated with rs1545341[chr1:208349087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More