EnhancerDB
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  3. rs1550523[chr6:13417712]
Enhancers that have rs1550523[chr6:13417712]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13417125 13443009 enh8962
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs1550523[chr6:13417712]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13417708 13417712 YY1 TRANSFAC yes 100028192
chr6 13417709 13417719 NFATC3 JASPAR yes 100028193
chr6 13417710 13417717 NFATC2 JASPAR yes 100028194
Genes associated with rs1550523[chr6:13417712], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More