EnhancerDB
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  3. rs1550524[chr6:13395789]
Enhancers that have rs1550524[chr6:13395789]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13393585 13416889 enh8961
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1550524[chr6:13395789]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13395784 13395791 JUN TRANSFAC yes 100025120
chr6 13395784 13395802 SRF JASPAR yes 100025121
chr6 13395789 13395797 GATA1 TRANSFAC yes 100025122
chr6 13395789 13395803 GATA2 JASPAR yes 100025123
Genes associated with rs1550524[chr6:13395789], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More