EnhancerDB
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Enhancers that have rs1552265[chr16:85455302]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85446773 85473775 enh16869
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs1552265[chr16:85455302]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85451678 85455380 ZNF143 GTRD no Epithelial (MCF-7) 21725360
chr16 85451685 85455978 ZNF143 GTRD no Epithelial (MCF-7) 21725362
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 21725378
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214476
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214477
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 21725385
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 108214478
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 108214479
chr16 85453063 85456595 ZNF143 GTRD no Epithelial (MCF-7) 21725395
chr16 85453063 85456595 ZNF143 GTRD no Epithelial (MCF-7) 108214480
chr16 85454314 85455388 ZNF274 GTRD no Bone Marrow (K562) 21725417
chr16 85454585 85455351 ZNF274 GTRD no Bone Marrow (K562) 21725458
chr16 85454868 85457486 TCF7L2 GTRD no Colon (HCT116) 21725460
chr16 85454868 85457486 TCF7L2 GTRD no Colon (HCT116) 108214481
chr16 85455014 85458001 ZNF143 GTRD no Epithelial (MCF-7) 21725461
chr16 85455014 85458001 ZNF143 GTRD no Epithelial (MCF-7) 108214482
chr16 85455091 85455383 ZNF274 GTRD no Bone Marrow (K562) 21725462
chr16 85455296 85455308 TFAP2A JASPAR yes 12059122
chr16 85455296 85455308 TFAP2B JASPAR yes 12059123
chr16 85455296 85455308 TFAP2C JASPAR yes 12059124
chr16 85455300 85455311 E2F6 JASPAR yes 12059125
Genes associated with rs1552265[chr16:85455302], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More