EnhancerDB
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  3. rs1552606[chr1:151894217]
Enhancers that have rs1552606[chr1:151894217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151885865 151921875 enh624
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs1552606[chr1:151894217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151893984 151894274 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21338054
chr1 151893996 151894300 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21338055
chr1 151894003 151894283 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21338056
chr1 151894007 151894267 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21338057
chr1 151894021 151894225 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21338058
chr1 151894025 151894273 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21338059
chr1 151894031 151894300 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21338060
chr1 151894036 151894346 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21338061
chr1 151894077 151894226 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21338062
chr1 151894079 151894228 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21338063
chr1 151894096 151894360 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21338064
chr1 151894160 151894291 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21338066
chr1 151894217 151894236 CTCF JASPAR yes 32202597
Genes associated with rs1552606[chr1:151894217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More