EnhancerDB
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  3. rs1556938[chr1:180489915]
Enhancers that have rs1556938[chr1:180489915]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs1556938[chr1:180489915]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180489779 180490857 TEF1 GTRD no Bone (Osteoblast) 21353313
chr1 180489909 180489916 GATA1 TRANSFAC yes 33520259
chr1 180489912 180489916 TEAD2 TRANSFAC yes 33520260
chr1 180489912 180489927 SOX21 JASPAR yes 33520261
chr1 180489912 180489928 SOX4 JASPAR yes 33520262
chr1 180489914 180489925 PROP1 JASPAR yes 33520263
Genes associated with rs1556938[chr1:180489915], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More