EnhancerDB
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  3. rs1561947[chr17:55478492]
Enhancers that have rs1561947[chr17:55478492]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1561947[chr17:55478492]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55478489 55478499 EVX2 JASPAR yes 54951070
chr17 55478489 55478499 GSX1 JASPAR yes 54951071
chr17 55478489 55478499 HOXA2 JASPAR yes 54951072
chr17 55478489 55478499 NOTO JASPAR yes 54951073
chr17 55478490 55478500 POU6F2 JASPAR yes 54951074
Genes associated with rs1561947[chr17:55478492], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More