EnhancerDB
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  3. rs1566930[chr12:116932278]
Enhancers that have rs1566930[chr12:116932278]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116926365 116948935 enh43835
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs1566930[chr12:116932278]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116931971 116932441 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21577106
chr12 116932266 116932278 PKNOX1 JASPAR yes 124002399
chr12 116932266 116932278 PKNOX2 JASPAR yes 124002400
chr12 116932266 116932278 TGIF1 JASPAR yes 124002401
chr12 116932266 116932278 TGIF2 JASPAR yes 124002402
chr12 116932266 116932282 T JASPAR yes 124002403
chr12 116932277 116932289 PKNOX2 JASPAR yes 124002408
chr12 116932278 116932284 YY1 JASPAR yes 124002409
Genes associated with rs1566930[chr12:116932278], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More