EnhancerDB
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  3. rs1569405[chr1:201680872]
Enhancers that have rs1569405[chr1:201680872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1569405[chr1:201680872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201680867 201680888 IRF1 JASPAR yes 34523131
chr1 201680869 201680884 IRF9 JASPAR yes 34523132
chr1 201680870 201680884 IRF7 JASPAR yes 34523133
chr1 201680872 201680884 IRF1 JASPAR yes 34523134
Genes associated with rs1569405[chr1:201680872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More