EnhancerDB
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  3. rs1570829[chr1:236108170]
Enhancers that have rs1570829[chr1:236108170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236091945 236120510 enh12806
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs1570829[chr1:236108170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236107848 236109671 TEF1 GTRD no Bone (Osteoblast) 21404047
chr1 236107848 236109671 TEF1 GTRD no Bone (Osteoblast) 107886376
chr1 236108153 236108170 RARA JASPAR yes 36391275
chr1 236108164 236108180 GLIS1 JASPAR yes 36391278
chr1 236108165 236108179 GLIS2 JASPAR yes 36391279
chr1 236108165 236108179 GLIS3 JASPAR yes 36391280
Genes associated with rs1570829[chr1:236108170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More