EnhancerDB
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  3. rs1580466[chr15:65103434]
Enhancers that have rs1580466[chr15:65103434]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 65090749 65107680 enh16235
Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Lung Blood (GM12878) Stomach Colon (HCT116) Placenta Uterus Embryonic Stem Cell Line (H1-hESC) Spleen Neural Stem Cells (H9) Heart
chr15 65103266 65103574 vista20336
VISTA
Transcript factors that have rs1580466[chr15:65103434]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 65103156 65103646 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21659804
chr15 65103156 65103646 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108145898
chr15 65103159 65103739 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21659805
chr15 65103159 65103739 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108145899
chr15 65103245 65103501 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21659806
chr15 65103245 65103501 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108145900
chr15 65103249 65103585 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21659807
chr15 65103249 65103585 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108145901
chr15 65103391 65103490 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21659808
chr15 65103391 65103490 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108145902
chr15 65103429 65103437 OTX2 JASPAR yes 24067484
chr15 65103429 65103437 OTX2 JASPAR yes 70541426
Genes associated with rs1580466[chr15:65103434], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More