EnhancerDB
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  3. rs1594090[chr3:16438847]
Enhancers that have rs1594090[chr3:16438847]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 16422468 16448575 enh7030
Skin (Keratinocyte) Kidney Epithelial (MCF-7) Brain (SK-N-SH) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Breast Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs1594090[chr3:16438847]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 16438834 16438853 RFX2 JASPAR yes 721854
chr3 16438836 16438851 RFX5 JASPAR yes 721855
chr3 16438838 16438854 RFX5 JASPAR yes 721856
Genes associated with rs1594090[chr3:16438847], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More