EnhancerDB
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  3. rs1609841[chr1:208367614]
Enhancers that have rs1609841[chr1:208367614]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208343485 208368555 enh12612
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs1609841[chr1:208367614]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208367613 208367623 EMX1 JASPAR yes 34905802
chr1 208367613 208367623 GSX2 JASPAR yes 34905803
chr1 208367613 208367623 HOXA2 JASPAR yes 34905804
chr1 208367613 208367623 HOXB2 JASPAR yes 34905805
chr1 208367613 208367623 HOXB3 JASPAR yes 34905806
chr1 208367613 208367623 LHX2 JASPAR yes 34905807
chr1 208367613 208367623 MEOX1 JASPAR yes 34905808
chr1 208367613 208367623 NOTO JASPAR yes 34905809
chr1 208367614 208367622 NKX6-1 JASPAR yes 34905810
chr1 208367614 208367622 NKX6-2 JASPAR yes 34905811
chr1 208367614 208367624 POU6F2 JASPAR yes 34905812
Genes associated with rs1609841[chr1:208367614], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More