EnhancerDB
  1. Home
  2. SNP
  3. rs1612516[chr1:53879610]
Enhancers that have rs1612516[chr1:53879610]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53871953 53884901 enh26703
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs1612516[chr1:53879610]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53879595 53879616 ZNF263 JASPAR yes 28930134
chr1 53879603 53879620 RXRA JASPAR yes 28930135
chr1 53879609 53879619 SP1 JASPAR yes 28930136
Genes associated with rs1612516[chr1:53879610], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More