EnhancerDB
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  3. rs1639890[chr11:61385870]
Enhancers that have rs1639890[chr11:61385870]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 61360185 61399298 enh13959
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1639890[chr11:61385870]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 61384461 61386179 ZNF143 GTRD no Epithelial (MCF-7) 21486500
chr11 61384492 61386175 ZNF143 GTRD no Epithelial (MCF-7) 21486502
chr11 61384503 61386273 ZNF274 GTRD no Cervix (HeLa-S3) 21486503
chr11 61384863 61386169 ZNF274 GTRD no Liver (HepG2) 21486512
chr11 61384916 61385947 ZNF274 GTRD no Cervix (HeLa-S3) 21486516
chr11 61385157 61386084 ZNF274 GTRD no Cervix (HeLa-S3) 21486524
chr11 61385329 61386127 ZNF274 GTRD no Cervix (HeLa-S3) 21486525
chr11 61385337 61386021 ZNF274 GTRD no Liver (HepG2) 21486526
chr11 61385410 61386160 ZNF143 GTRD no Epithelial (MCF-7) 21486527
chr11 61385414 61386002 ZNF274 GTRD no Liver (HepG2) 21486528
chr11 61385425 61385997 ZNF143 GTRD no Epithelial (MCF-7) 21486529
chr11 61385428 61386051 ZNF274 GTRD no Cervix (HeLa-S3) 21486530
chr11 61385439 61386088 CTCF GTRD no Lung 21486531
chr11 61385461 61385962 ZNF274 GTRD no Liver (HepG2) 21486532
chr11 61385463 61386368 ZNF143 GTRD no Epithelial (MCF-7) 21486533
chr11 61385482 61386028 ZNF274 GTRD no Liver (HepG2) 21486534
chr11 61385484 61386013 ZNF274 GTRD no Liver (HepG2) 21486535
chr11 61385485 61385990 ZNF274 GTRD no Cervix (HeLa-S3) 21486536
chr11 61385486 61386024 ZNF274 GTRD no Cervix (HeLa-S3) 21486537
chr11 61385497 61386009 ZNF274 GTRD no Liver (HepG2) 21486538
chr11 61385497 61386089 ZNF143 GTRD no Epithelial (MCF-7) 21486539
chr11 61385500 61386001 ZNF274 GTRD no Liver (HepG2) 21486540
chr11 61385505 61385978 ZNF274 GTRD no Liver (HepG2) 21486541
chr11 61385507 61385989 ZNF274 GTRD no Liver (HepG2) 21486542
chr11 61385508 61386049 ZNF274 GTRD no Liver (HepG2) 21486543
chr11 61385525 61385974 ZNF143 GTRD no Epithelial (MCF-7) 21486544
chr11 61385537 61386009 ZNF274 GTRD no Liver (HepG2) 21486545
chr11 61385539 61386017 TCF7L2 GTRD no Colon (HCT116) 21486546
chr11 61385543 61385897 ZNF274 GTRD no Liver (HepG2) 21486547
chr11 61385566 61385995 ZNF274 GTRD no Liver (HepG2) 21486548
chr11 61385570 61386070 ZNF143 GTRD no Epithelial (MCF-7) 21486549
chr11 61385575 61385996 ZNF143 GTRD no Epithelial (MCF-7) 21486550
chr11 61385576 61386016 CTCF GTRD no Kidney 21486551
chr11 61385597 61386190 ZNF143 GTRD no Epithelial (MCF-7) 21486552
chr11 61385611 61385950 ZNF274 GTRD no Cervix (HeLa-S3) 21486553
chr11 61385623 61386164 ZNF143 GTRD no Epithelial (MCF-7) 21486554
chr11 61385641 61385958 ZNF274 GTRD no Liver (HepG2) 21486555
chr11 61385650 61385920 ZNF274 GTRD no Liver (HepG2) 21486556
chr11 61385650 61386172 ZNF143 GTRD no Epithelial (MCF-7) 21486557
chr11 61385652 61385995 ZNF143 GTRD no Epithelial (MCF-7) 21486558
chr11 61385673 61386167 ZNF143 GTRD no Epithelial (MCF-7) 21486559
chr11 61385858 61386187 ZNF143 GTRD no Epithelial (MCF-7) 21486560
chr11 61385865 61385871 ZNF354C JASPAR yes 39152557
chr11 61385870 61385877 SP1 TRANSFAC yes 39152558
Genes associated with rs1639890[chr11:61385870], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More