EnhancerDB
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  3. rs1667[chr12:46864731]
Enhancers that have rs1667[chr12:46864731]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1667[chr12:46864731]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46864682 46865232 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541820
chr12 46864688 46865028 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541821
chr12 46864721 46864737 RFX2 JASPAR yes 120625658
chr12 46864721 46864737 RFX3 JASPAR yes 120625659
chr12 46864721 46864737 RFX4 JASPAR yes 120625660
chr12 46864721 46864737 RFX5 JASPAR yes 120625661
Genes associated with rs1667[chr12:46864731], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More