EnhancerDB
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  3. rs1679977[chr1:53588494]
Enhancers that have rs1679977[chr1:53588494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53585345 53605635 enh11856
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Stomach Placenta Uterus Blood (T-cell) Heart
chr1 53588397 53588520 vista1612
VISTA
Transcript factors that have rs1679977[chr1:53588494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53588492 53588504 TFAP2A JASPAR yes 28913059
chr1 53588492 53588504 TFAP2B JASPAR yes 28913060
chr1 53588492 53588504 TFAP2C JASPAR yes 28913061
chr1 53588492 53588504 TFAP2A JASPAR yes 118291136
chr1 53588492 53588504 TFAP2B JASPAR yes 118291137
chr1 53588492 53588504 TFAP2C JASPAR yes 118291138
Genes associated with rs1679977[chr1:53588494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More