EnhancerDB
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  3. rs16822627[chr2:227639089]
Enhancers that have rs16822627[chr2:227639089]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227617325 227640615 enh6179
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs16822627[chr2:227639089]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227639088 227639109 IRF1 JASPAR yes 81495267
Genes associated with rs16822627[chr2:227639089], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More