EnhancerDB
  1. Home
  2. SNP
  3. rs16828664[chr1:178924853]
Enhancers that have rs16828664[chr1:178924853]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178892945 178926835 enh769
Epithelial (MCF-7) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs16828664[chr1:178924853]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178924849 178924861 POU2F1 JASPAR yes 33457286
chr1 178924849 178924862 POU3F3 JASPAR yes 33457287
chr1 178924849 178924863 POU1F1 JASPAR yes 33457288
chr1 178924850 178924862 POU3F1 JASPAR yes 33457289
chr1 178924850 178924862 POU3F2 JASPAR yes 33457290
chr1 178924851 178924860 POU3F4 JASPAR yes 33457291
chr1 178924851 178924860 POU5F1B JASPAR yes 33457292
chr1 178924851 178924862 FOXB1 JASPAR yes 33457293
chr1 178924853 178924868 HNF1A JASPAR yes 33457294
chr1 178924853 178924868 MEF2A JASPAR yes 33457295
Genes associated with rs16828664[chr1:178924853], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More