EnhancerDB
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  3. rs16842040[chr1:223903926]
Enhancers that have rs16842040[chr1:223903926]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs16842040[chr1:223903926]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223903920 223903935 HNF4A JASPAR yes 35671714
chr1 223903921 223903935 NR2F1 JASPAR yes 35671715
chr1 223903921 223903935 RXRB JASPAR yes 35671716
chr1 223903921 223903935 RXRG JASPAR yes 35671717
chr1 223903921 223903936 HNF4G JASPAR yes 35671718
Genes associated with rs16842040[chr1:223903926], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More