EnhancerDB
  1. Home
  2. SNP
  3. rs16848610[chr1:201423658]
Enhancers that have rs16848610[chr1:201423658]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs16848610[chr1:201423658]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201423236 201424441 ZNF143 GTRD no Epithelial (MCF-7) 21364048
chr1 201423568 201424474 ZNF143 GTRD no Epithelial (MCF-7) 21364049
chr1 201423578 201424279 ZNF143 GTRD no Epithelial (MCF-7) 21364050
chr1 201423586 201424428 ZNF143 GTRD no Epithelial (MCF-7) 21364051
chr1 201423649 201423660 DMRT3 JASPAR yes 34495343
chr1 201423654 201423667 POU3F3 JASPAR yes 34495344
Genes associated with rs16848610[chr1:201423658], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More