EnhancerDB
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  3. rs16849098[chr1:229002615]
Enhancers that have rs16849098[chr1:229002615]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228982305 229013678 enh12753
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Astrocyte Lung (A549) Stomach Placenta Breast Uterus Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs16849098[chr1:229002615]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229002300 229002640 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21389130
chr1 229002314 229002872 ZNF143 GTRD no Epithelial (MCF-7) 21389131
chr1 229002609 229002615 LEF1 TRANSFAC yes 35938111
chr1 229002609 229002615 SOX10 JASPAR yes 35938112
chr1 229002612 229002623 HOXC12 JASPAR yes 35938113
chr1 229002613 229002623 HOXC10 JASPAR yes 35938114
chr1 229002613 229002623 HOXD11 JASPAR yes 35938115
Genes associated with rs16849098[chr1:229002615], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More