EnhancerDB
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  3. rs16849568[chr1:229339670]
Enhancers that have rs16849568[chr1:229339670]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229330645 229348935 enh12763
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Ovary Blood (T-cell) Esophagus Brain (SK-N-MC) Stomach Muscle (A673) Placenta Uterus Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs16849568[chr1:229339670]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229339162 229339682 ATF2 UCSC Txn Factor no Conserved 107877826
chr1 229339162 229339682 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107877827
chr1 229339279 229340132 ZNF143 GTRD no Epithelial (MCF-7) 21390628
chr1 229339279 229340132 ZNF143 GTRD no Epithelial (MCF-7) 107877844
chr1 229339388 229339990 GATA3 GTRD no Thymus 21390632
chr1 229339388 229339990 GATA3 GTRD no Thymus 107877857
chr1 229339402 229340162 ZNF143 GTRD no Epithelial (MCF-7) 21390633
chr1 229339402 229340162 ZNF143 GTRD no Epithelial (MCF-7) 107877858
chr1 229339489 229339964 ZNF274 GTRD no Cervix (HeLa-S3) 21390634
chr1 229339489 229339964 ZNF274 GTRD no Cervix (HeLa-S3) 107877859
chr1 229339553 229339957 ZNF274 GTRD no Bone Marrow (K562) 107877860
chr1 229339580 229339923 ZNF143 GTRD no Epithelial (MCF-7) 21390635
Genes associated with rs16849568[chr1:229339670], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More