EnhancerDB
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  3. rs16852773[chr1:204049929]
Enhancers that have rs16852773[chr1:204049929]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs16852773[chr1:204049929]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204049498 204050018 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370091
chr1 204049498 204050018 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859556
chr1 204049563 204050053 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370095
chr1 204049563 204050053 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859560
chr1 204049570 204049940 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370097
chr1 204049570 204049940 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859563
chr1 204049615 204049972 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370102
chr1 204049615 204049972 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859568
chr1 204049649 204050025 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370103
chr1 204049649 204050025 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859569
chr1 204049678 204049938 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370105
chr1 204049678 204049938 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859571
chr1 204049927 204049931 TEAD2 TRANSFAC yes 34677048
Genes associated with rs16852773[chr1:204049929], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More