EnhancerDB
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  3. rs16869280[chr6:33575395]
Enhancers that have rs16869280[chr6:33575395]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs16869280[chr6:33575395]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33575388 33575400 TFAP2A JASPAR yes 101160479
chr6 33575388 33575400 TFAP2B JASPAR yes 101160480
chr6 33575388 33575400 TFAP2C JASPAR yes 101160481
chr6 33575390 33575399 TFAP2A JASPAR yes 101160482
Genes associated with rs16869280[chr6:33575395], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More