EnhancerDB
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  3. rs16871204[chr6:11277525]
Enhancers that have rs16871204[chr6:11277525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11250905 11281835 enh23019
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
chr6 11277425 11277816 vista50799
VISTA
Transcript factors that have rs16871204[chr6:11277525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11277415 11277724 FOXA1 UCSC Txn Factor no Conserved 108538352
chr6 11277420 11277736 FOXA2 UCSC Txn Factor no Conserved 108538353
chr6 11277455 11278914 POLR2A UCSC Txn Factor no Conserved 108538354
chr6 11277455 11278914 POLR2A UCSC Txn Factor no Conserved 108538355
chr6 11277455 11278914 POLR2A UCSC Txn Factor no Conserved 108538356
chr6 11277520 11277535 FOXP1 JASPAR yes 70307765
chr6 11277520 11277535 FOXP1 JASPAR yes 99871852
chr6 11277521 11277532 FOXA1 JASPAR yes 70307766
chr6 11277521 11277532 FOXA1 JASPAR yes 99871853
chr6 11277521 11277536 FOXA1 JASPAR yes 70307767
chr6 11277521 11277536 FOXA1 JASPAR yes 99871854
chr6 11277522 11277533 FOXB1 JASPAR yes 70307768
chr6 11277522 11277533 FOXC1 JASPAR yes 70307769
chr6 11277522 11277533 FOXB1 JASPAR yes 99871855
chr6 11277522 11277533 FOXC1 JASPAR yes 99871856
chr6 11277522 11277534 FOXC2 JASPAR yes 70307770
chr6 11277522 11277534 FOXC2 JASPAR yes 99871857
chr6 11277523 11277534 FOXP2 JASPAR yes 70307771
chr6 11277523 11277534 FOXP2 JASPAR yes 99871858
chr6 11277524 11277532 FOXO3 JASPAR yes 70307772
chr6 11277524 11277532 FOXO3 JASPAR yes 99871859
chr6 11277525 11277532 FOXD2 JASPAR yes 70307773
chr6 11277525 11277532 FOXI1 JASPAR yes 70307774
chr6 11277525 11277532 FOXL1 JASPAR yes 70307775
chr6 11277525 11277532 FOXO4 JASPAR yes 70307776
chr6 11277525 11277532 FOXO6 JASPAR yes 70307777
chr6 11277525 11277532 FOXP3 JASPAR yes 70307778
chr6 11277525 11277532 FOXD2 JASPAR yes 99871860
chr6 11277525 11277532 FOXI1 JASPAR yes 99871861
chr6 11277525 11277532 FOXL1 JASPAR yes 99871862
chr6 11277525 11277532 FOXO4 JASPAR yes 99871863
chr6 11277525 11277532 FOXO6 JASPAR yes 99871864
chr6 11277525 11277532 FOXP3 JASPAR yes 99871865
chr6 11277525 11277533 FOXD1 JASPAR yes 70307779
chr6 11277525 11277533 FOXG1 JASPAR yes 70307780
chr6 11277525 11277533 FOXO3 JASPAR yes 70307781
chr6 11277525 11277533 FOXD1 JASPAR yes 99871866
chr6 11277525 11277533 FOXG1 JASPAR yes 99871867
chr6 11277525 11277533 FOXO3 JASPAR yes 99871868
Genes associated with rs16871204[chr6:11277525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More