EnhancerDB
  1. Home
  2. SNP
  3. rs16871254[chr6:11323227]
Enhancers that have rs16871254[chr6:11323227]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11314009 11328675 enh23020
Astrocyte Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs16871254[chr6:11323227]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11323213 11323230 BCL6B JASPAR yes 99876115
chr6 11323216 11323227 STAT1 JASPAR yes 99876116
chr6 11323221 11323237 POU4F2 JASPAR yes 99876117
chr6 11323221 11323237 POU4F3 JASPAR yes 99876118
chr6 11323227 11323237 HOXA13 JASPAR yes 99876119
chr6 11323227 11323237 HOXB13 JASPAR yes 99876120
chr6 11323227 11323237 HOXD13 JASPAR yes 99876121
chr6 11323227 11323238 HOXC13 JASPAR yes 99876122
Genes associated with rs16871254[chr6:11323227], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More