EnhancerDB
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  3. rs16872653[chr6:12324483]
Enhancers that have rs16872653[chr6:12324483]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12317105 12339155 enh23034
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (GM12878) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 12324386 12324755 vista50904
VISTA
Transcript factors that have rs16872653[chr6:12324483]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12324314 12324664 ELK1 UCSC Txn Factor no Conserved 108538531
chr6 12324354 12324816 EP300 UCSC Txn Factor no Conserved 108538532
chr6 12324411 12324686 CEBPB UCSC Txn Factor no Conserved 108538533
chr6 12324434 12324782 NR3C1 UCSC Txn Factor no Conserved 108538534
chr6 12324468 12324484 SRF JASPAR yes 70313364
chr6 12324468 12324484 SRF JASPAR yes 99960559
chr6 12324468 12324486 SRF JASPAR yes 70313365
chr6 12324468 12324486 SRF JASPAR yes 99960560
chr6 12324475 12324740 FOSL2 UCSC Txn Factor no Conserved 108538535
chr6 12324475 12324751 JUND UCSC Txn Factor no Conserved 108538536
chr6 12324478 12324697 FOS UCSC Txn Factor no Conserved 108538537
chr6 12324480 12324494 SPIC JASPAR yes 70313367
chr6 12324480 12324494 SPIC JASPAR yes 99960562
Genes associated with rs16872653[chr6:12324483], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More