EnhancerDB
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  3. rs1688125[chr19:3143671]
Enhancers that have rs1688125[chr19:3143671]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3138785 3144645 enh17859
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Muscle (A673) Placenta Lung (PC-9) Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs1688125[chr19:3143671]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3143659 3143671 MEF2A JASPAR yes 112114586
chr19 3143659 3143671 MEF2B JASPAR yes 112114587
chr19 3143659 3143671 MEF2D JASPAR yes 112114588
chr19 3143661 3143672 CDX2 JASPAR yes 112114589
chr19 3143662 3143673 HOXA10 JASPAR yes 112114590
chr19 3143663 3143672 CDX1 JASPAR yes 112114591
chr19 3143663 3143673 HOXA13 JASPAR yes 112114592
chr19 3143663 3143673 HOXB13 JASPAR yes 112114593
chr19 3143663 3143673 HOXD13 JASPAR yes 112114594
chr19 3143664 3143685 IRF1 JASPAR yes 112114595
chr19 3143667 3143673 TBP TRANSFAC yes 112114596
chr19 3143668 3143683 STAT2 JASPAR yes 112114597
chr19 3143669 3143681 IRF1 JASPAR yes 112114598
Genes associated with rs1688125[chr19:3143671], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More