EnhancerDB
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  3. rs16942678[chr12:113691141]
Enhancers that have rs16942678[chr12:113691141]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 113663085 113691755 enh2610
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs16942678[chr12:113691141]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 113691138 113691144 GATA3 JASPAR yes 123820576
chr12 113691138 113691150 PKNOX1 JASPAR yes 123820577
chr12 113691138 113691150 PKNOX2 JASPAR yes 123820578
chr12 113691138 113691150 TGIF1 JASPAR yes 123820579
chr12 113691138 113691150 TGIF2 JASPAR yes 123820580
chr12 113691141 113691152 TBX2 JASPAR yes 123820581
Genes associated with rs16942678[chr12:113691141], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More