EnhancerDB
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  3. rs16949527[chr17:49035711]
Enhancers that have rs16949527[chr17:49035711]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs16949527[chr17:49035711]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49035060 49036748 ZNF143 GTRD no Epithelial (MCF-7) 21771875
chr17 49035127 49036359 TCF7L2 GTRD no Colon (HCT116) 21771876
chr17 49035203 49036690 ZNF143 GTRD no Epithelial (MCF-7) 21771877
chr17 49035215 49036454 ZNF143 GTRD no Epithelial (MCF-7) 21771878
chr17 49035215 49036679 ZNF143 GTRD no Epithelial (MCF-7) 21771879
chr17 49035231 49036464 TCF7L2 GTRD no Colon (HCT116) 21771880
chr17 49035241 49036441 TCF7L2 GTRD no Colon (HCT116) 21771881
chr17 49035244 49036768 ZNF143 GTRD no Epithelial (MCF-7) 21771882
chr17 49035257 49036419 ZNF143 GTRD no Epithelial (MCF-7) 21771883
chr17 49035272 49036503 TCF7L2 GTRD no Colon (HCT116) 21771884
chr17 49035273 49036846 ZNF143 GTRD no Epithelial (MCF-7) 21771885
chr17 49035275 49036437 TCF7L2 GTRD no Colon (HCT116) 21771886
chr17 49035300 49036423 TCF7L2 GTRD no Colon (HCT116) 21771887
chr17 49035304 49036434 ZNF274 GTRD no Bone Marrow (K562) 21771888
chr17 49035304 49036652 TCF7L2 GTRD no Colon (HCT116) 21771889
chr17 49035305 49036614 ZNF143 GTRD no Epithelial (MCF-7) 21771890
chr17 49035317 49037099 ZNF143 GTRD no Epithelial (MCF-7) 21771891
chr17 49035323 49036453 ZNF143 GTRD no Epithelial (MCF-7) 21771892
chr17 49035329 49035989 TCF7L2 GTRD no Colon (HCT116) 21771893
chr17 49035348 49036710 ZNF143 GTRD no Epithelial (MCF-7) 21771894
chr17 49035371 49036084 ZNF274 GTRD no Bone Marrow (K562) 21771895
chr17 49035371 49036445 ZNF143 GTRD no Epithelial (MCF-7) 21771896
chr17 49035395 49036487 TCF7L2 GTRD no Colon (HCT116) 21771897
chr17 49035396 49036445 ZNF143 GTRD no Epithelial (MCF-7) 21771898
chr17 49035396 49036491 TCF7L2 GTRD no Colon (HCT116) 21771899
chr17 49035404 49036436 ZBTB33 GTRD no Brain (SK-N-SH) 21771900
chr17 49035409 49036476 ZNF143 GTRD no Epithelial (MCF-7) 21771901
chr17 49035412 49036603 ZNF143 GTRD no Epithelial (MCF-7) 21771902
chr17 49035418 49036945 ZNF143 GTRD no Epithelial (MCF-7) 21771903
chr17 49035436 49036451 ZNF143 GTRD no Epithelial (MCF-7) 21771904
chr17 49035449 49036341 TCF7L2 GTRD no Colon (HCT116) 21771905
chr17 49035478 49036588 ZNF274 GTRD no Bone Marrow (K562) 21771906
chr17 49035480 49036543 ZNF274 GTRD no Bone Marrow (K562) 21771907
chr17 49035502 49036451 TCF7L2 GTRD no Colon (HCT116) 21771908
chr17 49035509 49036689 ZNF143 GTRD no Epithelial (MCF-7) 21771909
chr17 49035553 49036459 ZNF143 GTRD no Epithelial (MCF-7) 21771910
chr17 49035555 49036582 ZNF143 GTRD no Epithelial (MCF-7) 21771911
chr17 49035561 49036406 ZBTB33 GTRD no Brain (SK-N-SH) 21771912
chr17 49035572 49036463 ZBTB33 GTRD no Brain (SK-N-SH) 21771913
chr17 49035589 49036422 TCF7L2 GTRD no Colon (HCT116) 21771914
chr17 49035605 49036515 ZNF143 GTRD no Epithelial (MCF-7) 21771915
chr17 49035644 49036359 ZNF274 GTRD no Bone Marrow (K562) 21771916
chr17 49035656 49036451 ZBTB33 GTRD no Brain (SK-N-SH) 21771917
chr17 49035669 49036451 ZNF274 GTRD no Liver (HepG2) 21771918
chr17 49035679 49036447 ZNF143 GTRD no Epithelial (MCF-7) 21771919
chr17 49035679 49036572 ZNF274 GTRD no Bone Marrow (K562) 21771920
chr17 49035686 49036625 ZNF274 GTRD no Blood (GM12878) 21771921
chr17 49035688 49036394 ZBTB33 GTRD no Brain (SK-N-SH) 21771922
chr17 49035689 49036428 ZNF274 GTRD no Blood (GM12878) 21771923
chr17 49035690 49036556 ZNF274 GTRD no Bone Marrow (K562) 21771924
chr17 49035692 49036561 ZNF274 GTRD no Liver (HepG2) 21771925
chr17 49035695 49036488 ZNF143 GTRD no Epithelial (MCF-7) 21771926
chr17 49035695 49036536 ZNF274 GTRD no Cervix (HeLa-S3) 21771927
chr17 49035707 49036491 ZNF274 GTRD no Bone Marrow (K562) 21771928
chr17 49035710 49035715 H4TF1 TRANSFAC yes 54739260
Genes associated with rs16949527[chr17:49035711], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More