EnhancerDB
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  3. rs16954203[chr17:4748582]
Enhancers that have rs16954203[chr17:4748582]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 4739171 4760073 enh16944
Bone Marrow (K562) Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 4748416 4748776 vista23806
VISTA
Transcript factors that have rs16954203[chr17:4748582]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 4747748 4748800 ZNF274 GTRD no Blood (GM12878) 108232801
chr17 4748483 4749016 ZNF274 GTRD no Bone Marrow (K562) 21740536
chr17 4748483 4749016 ZNF274 GTRD no Bone Marrow (K562) 108232802
chr17 4748550 4748672 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108232803
chr17 4748555 4748659 ZNF274 GTRD no Liver (HepG2) 21740537
chr17 4748555 4748659 ZNF274 GTRD no Liver (HepG2) 108232804
chr17 4748578 4748599 IRF1 JASPAR yes 21188729
chr17 4748578 4748599 IRF1 JASPAR yes 52857705
chr17 4748580 4748595 STAT2 JASPAR yes 21188730
chr17 4748580 4748595 STAT2 JASPAR yes 52857706
chr17 4748581 4748595 STAT1 JASPAR yes 21188731
chr17 4748581 4748595 STAT1 JASPAR yes 52857707
chr17 4748582 4748597 IRF9 JASPAR yes 21188732
chr17 4748582 4748597 IRF9 JASPAR yes 52857708
Genes associated with rs16954203[chr17:4748582], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More