EnhancerDB
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  3. rs16959593[chr17:64546244]
Enhancers that have rs16959593[chr17:64546244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64532553 64550230 enh4536
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs16959593[chr17:64546244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64546238 64546248 MAX JASPAR yes 55447569
chr17 64546238 64546250 HES5 JASPAR yes 55447570
chr17 64546238 64546250 HES7 JASPAR yes 55447571
chr17 64546239 64546249 BHLHE40 JASPAR yes 55447572
chr17 64546239 64546249 CLOCK JASPAR yes 55447573
chr17 64546239 64546249 HEY1 JASPAR yes 55447574
chr17 64546239 64546249 HEY2 JASPAR yes 55447575
chr17 64546239 64546249 MNT JASPAR yes 55447576
chr17 64546241 64546246 MYC TRANSFAC yes 55447577
chr17 64546241 64546246 USF1 TRANSFAC yes 55447578
chr17 64546241 64546246 USF2 TRANSFAC yes 55447579
Genes associated with rs16959593[chr17:64546244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More