EnhancerDB
  1. Home
  2. SNP
  3. rs16965802[chr17:38616541]
Enhancers that have rs16965802[chr17:38616541]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38602565 38623375 enh52499
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Uterus Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs16965802[chr17:38616541]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38615639 38618812 ZNF274 GTRD no Liver (HepG2) 21753966
chr17 38616134 38619833 POLR2A UCSC Txn Factor no Conserved 108255068
chr17 38616529 38616550 IRF1 JASPAR yes 54213287
chr17 38616531 38616546 IRF9 JASPAR yes 54213288
chr17 38616532 38616546 IRF7 JASPAR yes 54213289
chr17 38616532 38616546 IRF8 JASPAR yes 54213290
chr17 38616533 38616547 SPIC JASPAR yes 54213291
chr17 38616533 38616547 STAT1 JASPAR yes 54213292
chr17 38616533 38616548 PRDM1 JASPAR yes 54213293
chr17 38616533 38616548 STAT2 JASPAR yes 54213294
chr17 38616533 38616551 IRF2 JASPAR yes 54213295
Genes associated with rs16965802[chr17:38616541], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More