EnhancerDB
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  3. rs16965844[chr17:38663793]
Enhancers that have rs16965844[chr17:38663793]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs16965844[chr17:38663793]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38662501 38663879 ZNF274 GTRD no Liver (HepG2) 21754048
chr17 38662651 38663856 ZNF274 GTRD no Liver (HepG2) 21754050
chr17 38662661 38663870 ZNF143 GTRD no Epithelial (MCF-7) 21754051
chr17 38662679 38663856 ZNF274 GTRD no Bone Marrow (K562) 21754052
chr17 38662690 38664000 ZNF274 GTRD no Cervix (HeLa-S3) 21754053
chr17 38662721 38664016 ZNF143 GTRD no Epithelial (MCF-7) 21754054
chr17 38662790 38663796 ZNF274 GTRD no Liver (HepG2) 21754056
chr17 38662796 38663913 ZNF274 GTRD no Blood (GM12878) 21754057
chr17 38662810 38663874 ZNF274 GTRD no Blood (GM12878) 21754059
chr17 38662927 38664139 ZNF274 GTRD no Bone Marrow (K562) 21754074
chr17 38662983 38663822 ZNF274 GTRD no Liver (HepG2) 21754085
chr17 38662986 38663832 ZNF274 GTRD no Blood (GM12878) 21754088
chr17 38662992 38664070 ZNF274 GTRD no Blood (GM12878) 21754091
chr17 38663024 38663952 ZNF274 GTRD no Cervix (HeLa-S3) 21754101
chr17 38663035 38663859 ZNF274 GTRD no Cervix (HeLa-S3) 21754104
chr17 38663061 38663866 ZNF274 GTRD no Liver (HepG2) 21754119
chr17 38663064 38663797 ZNF274 GTRD no Bone Marrow (K562) 21754125
chr17 38663076 38663833 ZNF274 GTRD no Bone Marrow (K562) 21754135
chr17 38663133 38664380 TCF7L2 GTRD no Colon (HCT116) 21754163
chr17 38663135 38663846 ZNF143 GTRD no Epithelial (MCF-7) 21754165
chr17 38663157 38663797 ZNF274 GTRD no Blood (GM12878) 21754176
Genes associated with rs16965844[chr17:38663793], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More