EnhancerDB
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  3. rs16968353[chr15:39484350]
Enhancers that have rs16968353[chr15:39484350]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39472205 39509375 enh16053
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Placenta Colon (HCT116) Uterus Thyroid Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
chr15 39484062 39484453 vista19653
VISTA
Transcript factors that have rs16968353[chr15:39484350]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39483951 39484391 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21648196
chr15 39483951 39484391 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108132491
chr15 39484029 39484373 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21648201
chr15 39484029 39484373 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108132496
chr15 39484031 39484371 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21648202
chr15 39484031 39484371 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108132497
chr15 39484338 39484350 IRF1 JASPAR yes 22862413
chr15 39484338 39484350 IRF1 JASPAR yes 70508060
Genes associated with rs16968353[chr15:39484350], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More