EnhancerDB
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  3. rs16975523[chr16:85356074]
Enhancers that have rs16975523[chr16:85356074]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 85355565 85356105 vista23293
VISTA
Transcript factors that have rs16975523[chr16:85356074]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85354344 85356359 ZNF274 GTRD no Bone Marrow (K562) 21723435
chr16 85354344 85356359 ZNF274 GTRD no Bone Marrow (K562) 108213737
chr16 85354462 85356125 ZNF274 GTRD no Bone Marrow (K562) 21723449
chr16 85354462 85356125 ZNF274 GTRD no Bone Marrow (K562) 108213746
chr16 85355353 85356077 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723503
chr16 85355353 85356077 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108213792
chr16 85355892 85356182 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21723516
chr16 85355892 85356182 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108213809
chr16 85355895 85356175 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21723517
chr16 85355895 85356175 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108213810
chr16 85356028 85357863 ZNF143 GTRD no Epithelial (MCF-7) 21723518
chr16 85356028 85357863 ZNF143 GTRD no Epithelial (MCF-7) 108213811
chr16 85356040 85357907 TCF7L2 GTRD no Colon (HCT116) 21723519
chr16 85356040 85357907 TCF7L2 GTRD no Colon (HCT116) 108213812
chr16 85356056 85357821 ZNF143 GTRD no Epithelial (MCF-7) 21723520
chr16 85356056 85357821 ZNF143 GTRD no Epithelial (MCF-7) 108213813
chr16 85356068 85356083 RFX5 JASPAR yes 12047210
chr16 85356068 85356083 RFX5 JASPAR yes 49407754
Genes associated with rs16975523[chr16:85356074], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More