EnhancerDB
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  3. rs17014424[chr1:209568377]
Enhancers that have rs17014424[chr1:209568377]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs17014424[chr1:209568377]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209567605 209568451 P63 GTRD no Skin (Keratinocyte) 21375190
chr1 209567633 209568461 P63 GTRD no Skin (Keratinocyte) 21375191
chr1 209568368 209568382 NR2F1 JASPAR yes 34970718
chr1 209568368 209568382 RXRG JASPAR yes 34970719
chr1 209568372 209568382 RORA JASPAR yes 34970720
chr1 209568373 209568384 ESRRA JASPAR yes 34970721
chr1 209568373 209568384 ESRRB JASPAR yes 34970722
chr1 209568373 209568386 NR2F1 JASPAR yes 34970723
chr1 209568375 209568383 NR4A2 JASPAR yes 34970724
chr1 209568377 209568381 ESR1 TRANSFAC yes 34970725
Genes associated with rs17014424[chr1:209568377], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More