EnhancerDB
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  3. rs17023048[chr2:38932056]
Enhancers that have rs17023048[chr2:38932056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs17023048[chr2:38932056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38932054 38932058 YY1 TRANSFAC yes 73167603
chr2 38932056 38932066 HOXA13 JASPAR yes 73167604
chr2 38932056 38932066 HOXB13 JASPAR yes 73167605
chr2 38932056 38932066 HOXC10 JASPAR yes 73167606
chr2 38932056 38932066 HOXD11 JASPAR yes 73167607
chr2 38932056 38932066 HOXD13 JASPAR yes 73167608
chr2 38932056 38932067 HOXA10 JASPAR yes 73167609
chr2 38932056 38932067 HOXC11 JASPAR yes 73167610
chr2 38932056 38932067 HOXC12 JASPAR yes 73167611
chr2 38932056 38932067 HOXC13 JASPAR yes 73167612
chr2 38932056 38932067 HOXD12 JASPAR yes 73167613
Genes associated with rs17023048[chr2:38932056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More